2. Overview of wc_lang

2.1. Units

Quantity

Attributes

Dimensions

Units

Units class

Time

wc_lang.core.Model.time_units

time

s

wc_lang.core.TimeUnit

Compartment density

wc_lang.core.Compartment.density
wc_lang.core.Compartment.density_units

mass / volume

g l^-1

wc_lang.core.DensityUnit

Compartment volume

wc_lang.core.Compartment.volume
wc_lang.core.Compartment.volume_units

volume

l^-1

wc_lang.core.VolumeUnit

Distribution of initial
concentration of a
species at the beginning
of the cell cycle
wc_lang.core.Concentration.distribution
wc_lang.core.Concentration.mean
wc_lang.core.Concentration.std
wc_lang.core.Concentration.units
molecule,
molecule volume-1
molecule,
M

wc_lang.core.ConcentrationUnit

Species count

wc_lang.core.Species.units

molecule

molecule

wc_lang.core.MoleculeCountUnit

Observable count

wc_lang.core.ObservableExpression.expression
wc_lang.core.Observable.units

molecule

molecule

wc_lang.core.MoleculeCountUnit

Observable coefficient

wc_lang.core.ObservableExpression.expression

dimensionless

none

wc_lang.core.ObservableCoefficientUnit

Reaction participant

wc_lang.core.SpeciesCoefficient.coefficient

dimensionless

none

wc_lang.core.ReactionParticipantUnit

Reaction rate

wc_lang.core.RateLawExpression.expression
wc_lang.core.RateLaw.units
wc_lang.core.DfbaObjective.reaction_rate_units
wc_lang.core.DfbaObjReaction.units

time-1

s-1,

wc_lang.core.ReactionRateUnit

Reaction flux bounds

wc_lang.core.Reaction.flux_min
wc_lang.core.Reaction.flux_max
wc_lang.core.Reaction.flux_bound_units

volume-1 time-1

M s^-1

wc_lang.core.ReactionFluxUnit

dFBA objective

wc_lang.core.DfbaObjectiveExpresssion.expression
wc_lang.core.DfbaObjective.units

time-1

s^-1

wc_lang.core.DfbaObjectiveUnit

dFBA objective coefficient

wc_lang.core.DfbaObjectiveExpresssion.expression
wc_lang.core.DfbaObjective.coefficient_units

time

s

wc_lang.core.DfbaObjectiveCoefficientUnit

dFBA objective species

wc_lang.core.DfbaObjSpecies.value
wc_lang.core.DfbaObjSpecies.units
volume^-1 time^-1,
gDCW^-1 time^-1
M s^-1
mol gDCW^-1 s^-1

wc_lang.core.DfbaObjSpeciesUnit

Function

wc_lang.core.FunctionExpression.expression
wc_lang.core.Function.units

various

various

Parameter

wc_lang.core.Parameter.value
wc_lang.core.Parameter.units

various

various

Stop condition

wc_lang.core.StopCondition.expression
wc_lang.core.StopCondition.units

dimensionless

none

wc_lang.core.StopConditionUnit